Universitat Rovira i Virgili

Articles

Year of publication

2025

Ramponi, V., Richart, L., Kovatcheva, M., Stephan-Otto Attolini, C., Capellades, J., Lord, A. E.,

Yanes, O., Ficz, G.& Serrano, M. (2025). H4K20me3-Mediated Repression of Inflammatory

Genes Is a Characteristic and Targetable Vulnerability of Persister Cancer Cells. Cancer research,

85(1), 32-51. https://doi.org/10.1158/0008-5472.CAN-24-0529

Llauradó, G., Cedó, L., Climent, E., Badia, J., Rojo-Martínez, G., Flores-Le Roux, J., Yanes,
O., Vinaixa, M., Granado-Casas, M., Mauricio, D., Fernández-Veledo, S., & Vendrell, J.
(2025). Circulating short-chain fatty acids and Mediterranean food patterns. A potential role
for the prediction of type 2 diabetes risk: The Di@bet.es Study. BMC Medicine, 23(1), 337.
https://doi.org/10.1186/s12916-025-04186-9


Bookmeyer, C. H. M., Correig, F. X., Masana, L., Magni, P., Yanes, Ó., & Vinaixa, M. (2025).
Advancing atherosclerosis research: The Power of lipid imaging with MALDI-MSI.
Atherosclerosis. https://doi.org/10.1016/j.atherosclerosis.2025.119130


Girona, J., Guardiola, M., Barroso, E., García-Altares, M., Ibarretxe, D., Plana, N., Ribalta,
J., Amigó, N., Correig, X., Vázquez-Carrera, M., Masana Ll., Rodríguez-Calvo, R. (2025).
GDF15 Circulating Levels Are Associated with Metabolic-Associated Liver Injury and
Atherosclerotic Cardiovascular Disease. International Journal of Molecular Sciences, 26(5),
2039.


Mahamdi T, Serna CG, Giné R, Rofes J, Mohammed SA, Ràfols P, Correig X, García-Altares M,
Hopf C, Iakab SA, Yanes O. "Improving MALDI Mass Spectrometry Imaging Performance: Low-
Temperature Thermal Evaporation for Controlled Matrix Deposition and Improved Image Quality". J
Am Soc Mass Spectrom. 2025 Apr 18. doi: 10.1021/jasms.5c00015.


Barranco-Altirriba, M., Rossell, J., Alonso, N., Weber, Ralf J. M., Ortega, E., Lloyd, G.R.,
Hernandez, M., Yanes, O., Capellades, J., Winder, C., Junza, A., Falguera, M., Franch-
Nadal, J., Dunn, W. B., Perera-Lluna, A., Castelblanco, E., Mauricio, D. (2025). Lipidomic
analysis reveals metabolism alteration associated with subclinical carotid atherosclerosis in
type 2 diabetes. Cardiovascular diabetology, 24(1), 152.


Llambrich, M., van der Kloet, F. M., Sementé, L., Rodrigues, A., Samanipour, S., Stefanuto,
P. H., Westerhuis, J.A., Cumeras, R., Brezmes, J. GcDUO: an open-source software for GC×
GC-MS data analysis. Briefings in Bioinformatics, 26(2), bbaf080.


Santos-Pujol E. et al. "The Multiomics Blueprint of Extreme Human Lifespan". bioRxiv
2025.02.24.639740; doi:
https://doi.org/10.1101/2025.02.24.639740https://doi.org/10.1101/2025.02.24.639740.

Pérez-Ribera M, Faizan Khan M, Giné R, Badia JM, Junza A, Yanes O, Sales-Pardo M, Guimerà R.
"SingleFrag: A deep learning tool for MS/MS fragment and spectral prediction and metabolite

annotation". Briefings in Bioinformatics, 2025. Accepted


Faizan-Khan M, Giné R, Badia JM, Pérez-Ribera M, Junza A, Vinaixa M, Sales-Pardo M, Guimerà R,
Yanes O. "ChemEmbed: A deep learning framework for metabolite identification using enhanced
MS/MS data and multidimensional molecular embeddings". bioRxiv 2025.02.07.637102; doi:
https://doi.org/10.1101/2025.02.07.637102.